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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs7266721 chr20:30478937 G/A 9.76E-9 1005 21.17 23.37 11.2 KM Plot
BRCA rs72693191 chr4:169270494 T/G 1.54E-5 1013 21.62 21.35 14.1 KM Plot
BRCA rs7270433 chr20:25116776 A/G 2.27E-6 1026 21.67 22.92 13.52 KM Plot
BRCA rs7270464 chr20:25116546 G/A 2.27E-6 1026 21.5 23.4 13.52 KM Plot
BRCA rs7272141 chr20:25117199 A/C 1.21E-5 1020 22.08 23.07 13.5 KM Plot
BRCA rs72782518 chr10:16595658 T/A 3.67E-8 1024 22.2 19.67 16.48 KM Plot
BRCA rs72799519 chr10:70410320 G/A 5.74E-6 1023 22.1 19.7 18.8 KM Plot
BRCA rs72799526 chr10:70416642 A/G 4.53E-5 1012 23.53 19.1 14.93 KM Plot
BRCA rs72799527 chr10:70416884 C/T 4.97E-5 1016 23.48 19.23 14.93 KM Plot
BRCA rs72818793 chr2:76001583 T/C 5.1E-6 1020 21.43 24.6 26.4 KM Plot
BRCA rs72940115 chr2:86495225 T/A 2.61E-6 1026 21.95 19.47 12.17 KM Plot
BRCA rs72940124 chr2:86503079 T/G 2.62E-6 1024 21.97 19.47 12.17 KM Plot
BRCA rs72940126 chr2:86503151 G/A 2.62E-6 1024 21.97 19.47 12.17 KM Plot
BRCA rs72940131 chr2:86506374 G/A 2.62E-6 1023 21.98 19.47 12.17 KM Plot
BRCA rs7323925 chr13:24217160 G/T 1.51E-6 1028 29.83 21.02 21.53 KM Plot